"""Compatibility fixes for older version of python, numpy and scipy If you add content to this file, please give the version of the package at which the fix is no longer needed. """ # Authors: Emmanuelle Gouillart # Gael Varoquaux # Fabian Pedregosa # Lars Buitinck # # License: BSD 3 clause import sys from importlib import resources import numpy as np import scipy import scipy.sparse.linalg import scipy.stats import threadpoolctl import sklearn from ..externals._packaging.version import parse as parse_version from .deprecation import deprecated np_version = parse_version(np.__version__) np_base_version = parse_version(np_version.base_version) sp_version = parse_version(scipy.__version__) sp_base_version = parse_version(sp_version.base_version) try: from scipy.optimize._linesearch import line_search_wolfe1, line_search_wolfe2 except ImportError: # SciPy < 1.8 from scipy.optimize.linesearch import line_search_wolfe2, line_search_wolfe1 # type: ignore # noqa def _object_dtype_isnan(X): return X != X # Rename the `method` kwarg to `interpolation` for NumPy < 1.22, because # `interpolation` kwarg was deprecated in favor of `method` in NumPy >= 1.22. def _percentile(a, q, *, method="linear", **kwargs): return np.percentile(a, q, interpolation=method, **kwargs) if np_version < parse_version("1.22"): percentile = _percentile else: # >= 1.22 from numpy import percentile # type: ignore # noqa # compatibility fix for threadpoolctl >= 3.0.0 # since version 3 it's possible to setup a global threadpool controller to avoid # looping through all loaded shared libraries each time. # the global controller is created during the first call to threadpoolctl. def _get_threadpool_controller(): if not hasattr(threadpoolctl, "ThreadpoolController"): return None if not hasattr(sklearn, "_sklearn_threadpool_controller"): sklearn._sklearn_threadpool_controller = threadpoolctl.ThreadpoolController() return sklearn._sklearn_threadpool_controller def threadpool_limits(limits=None, user_api=None): controller = _get_threadpool_controller() if controller is not None: return controller.limit(limits=limits, user_api=user_api) else: return threadpoolctl.threadpool_limits(limits=limits, user_api=user_api) threadpool_limits.__doc__ = threadpoolctl.threadpool_limits.__doc__ def threadpool_info(): controller = _get_threadpool_controller() if controller is not None: return controller.info() else: return threadpoolctl.threadpool_info() threadpool_info.__doc__ = threadpoolctl.threadpool_info.__doc__ @deprecated( "The function `delayed` has been moved from `sklearn.utils.fixes` to " "`sklearn.utils.parallel`. This import path will be removed in 1.5." ) def delayed(function): from sklearn.utils.parallel import delayed return delayed(function) # TODO: Remove when SciPy 1.11 is the minimum supported version def _mode(a, axis=0): if sp_version >= parse_version("1.9.0"): mode = scipy.stats.mode(a, axis=axis, keepdims=True) if sp_version >= parse_version("1.10.999"): # scipy.stats.mode has changed returned array shape with axis=None # and keepdims=True, see https://github.com/scipy/scipy/pull/17561 if axis is None: mode = np.ravel(mode) return mode return scipy.stats.mode(a, axis=axis) # TODO: Remove when Scipy 1.12 is the minimum supported version if sp_base_version >= parse_version("1.12.0"): _sparse_linalg_cg = scipy.sparse.linalg.cg else: def _sparse_linalg_cg(A, b, **kwargs): if "rtol" in kwargs: kwargs["tol"] = kwargs.pop("rtol") if "atol" not in kwargs: kwargs["atol"] = "legacy" return scipy.sparse.linalg.cg(A, b, **kwargs) ############################################################################### # Backport of Python 3.9's importlib.resources # TODO: Remove when Python 3.9 is the minimum supported version def _open_text(data_module, data_file_name): if sys.version_info >= (3, 9): return resources.files(data_module).joinpath(data_file_name).open("r") else: return resources.open_text(data_module, data_file_name) def _open_binary(data_module, data_file_name): if sys.version_info >= (3, 9): return resources.files(data_module).joinpath(data_file_name).open("rb") else: return resources.open_binary(data_module, data_file_name) def _read_text(descr_module, descr_file_name): if sys.version_info >= (3, 9): return resources.files(descr_module).joinpath(descr_file_name).read_text() else: return resources.read_text(descr_module, descr_file_name) def _path(data_module, data_file_name): if sys.version_info >= (3, 9): return resources.as_file(resources.files(data_module).joinpath(data_file_name)) else: return resources.path(data_module, data_file_name) def _is_resource(data_module, data_file_name): if sys.version_info >= (3, 9): return resources.files(data_module).joinpath(data_file_name).is_file() else: return resources.is_resource(data_module, data_file_name) def _contents(data_module): if sys.version_info >= (3, 9): return ( resource.name for resource in resources.files(data_module).iterdir() if resource.is_file() ) else: return resources.contents(data_module) # For +1.25 NumPy versions exceptions and warnings are being moved # to a dedicated submodule. if np_version >= parse_version("1.25.0"): from numpy.exceptions import ComplexWarning, VisibleDeprecationWarning else: from numpy import ComplexWarning, VisibleDeprecationWarning # type: ignore # noqa # TODO: Remove when Scipy 1.6 is the minimum supported version try: from scipy.integrate import trapezoid # type: ignore # noqa except ImportError: from scipy.integrate import trapz as trapezoid # type: ignore # noqa